BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B11LP1|AL428504
(829 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1675 1551 0.0
>3x_Contig1675
Length = 13954
Score = 1551 bits (777), Expect = 0.0
Identities = 815/831 (98%), Gaps = 2/831 (0%)
Strand = Plus / Minus
Query: 1 gatctactctatcatgatgagt-cggattacatgatgttgacttatcatcattgacttct 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9200 gatctactctatcatgatgagttcggattacatgatgttgacttatcatcattgacttct 9141
Query: 60 catttaatgagtgttgatgaacctagtgagaaaag-atttacgccaagaaatactgcatt 118
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9140 catttaatgagtgttgatgaacctagtgagaaaagcatttacgccaagaaatactgcatt 9081
Query: 119 actacagtttgtggataagcagtccgtagaaaactgttgggaagcactaaggaaatactc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9080 actacagtttgtggataagcagtccgtagaaaactgttgggaagcactaaggaaatactc 9021
Query: 179 ttctagcaagaagcaacaacagatactgtgggaatttcaatccccatcaatcgagacatt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9020 ttctagcaagaagcaacaacagatactgtgggaatttcaatccccatcaatcgagacatt 8961
Query: 239 cacagcattctaccgtccattaccgttaaaatatttgaraacggatatacatgaacatat 298
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 8960 cacagcattctaccgtccattaccgttaaaatatttgaaaacggatatacatgaacatat 8901
Query: 299 ggctcttttcgaacaaagagaacagcaagctcaagaagaagtacaatcatctattgttga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8900 ggctcttttcgaacaaagagaacagcaagctcaagaagaagtacaatcatctattgttga 8841
Query: 359 tgaagatggtttcacattagtagtaggaaagaatacaaaatcattaaacagcataaggga 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8840 tgaagatggtttcacattagtagtaggaaagaatacaaaatcattaaacagcataaggaa 8781
Query: 419 aaagatattcaacagaratccattattaaagcatgagaracctaagaagatgcctaatat 478
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 8780 aaagatattcaacagaaatccattattaaagcatgagaaacctaagaagatgcctaatat 8721
Query: 479 ggttgacaagraggcaaagraggacttctatagattccmagtccgtgagagagagaagca 538
|||||||||| |||||||| |||||||||||||||||| ||||||||| ||| |||||||
Sbjct: 8720 ggttgacaagaaggcaaagaaggacttctatagattccaagtccgtgaaagaaagaagca 8661
Query: 539 ggarattgatgagttgctagccaaattcaagcvagatcaagagaagataaaggagatgaa 598
||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 8660 ggaaattaatgagttgctagccaaattcaagcaagatcaagaaaagataaaggagatgaa 8601
Query: 599 gtccaaaagaaggttcaacccgtacacataattatttgagaaaactttcctgataaggtg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8600 gtccaaaagaaggttcaacccgtacacataattatttgagaaaactttcctgataaggtg 8541
Query: 659 ctctatttgttatttactatagttgagaatgtgtctttgtacaacatacgtaactcttat 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8540 ctctatttgttatttactatagttgagaatgtgtctttgtacaacatacgtaactcttat 8481
Query: 719 agaaagagataattaatctatcaatacaattattcgttcatgaaagctctaaaatgaaag 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8480 agaaagagataattaatctatcaatacaattattcgttcatgaaagctctaaaatgaaag 8421
Query: 779 tttatggttgcttgccaagtgttttttccagttgatgaaggrggagataac 829
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 8420 tttatggttgcttgccaagtgttttttccagttgatgaaggaggagataac 8370
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6401
Number of Sequences: 1807
Number of extensions: 6401
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 829
length of database: 10,358,551
effective HSP length: 16
effective length of query: 813
effective length of database: 10,329,639
effective search space: 8397996507
effective search space used: 8397996507
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)